BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039D12LP1|AL430704
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1510 0.0
>3x_Contig1795
Length = 38452
Score = 1510 bits (751), Expect = 0.0
Identities = 908/979 (92%), Gaps = 1/979 (0%)
Strand = Plus / Minus
Query: 1 agtgtctcttatatcttagttttgttgttcgaatatatttatagattcatatacacgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38316 agtgtctcttatatcttagttttgttgttcgaatatatttatagattcatatacacgtat 38257
Query: 61 aatatatatatgcttatcaatattttttttctttcnttcttttgggtcagccatcacnca 120
||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||
Sbjct: 38256 aatatatatatgcttatcaatattttttttctttcattcttttggatcagcaatcacaca 38197
Query: 121 taganggatgagttcaaacatgttgatatggccttttatatgatcagggttacagcgtat 180
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 38196 tagaaggatgagttcaaacatgttgatatggccttttatatgatcaggattacagcgtat 38137
Query: 181 tatgccagagcctcacatatagtatagttgatagggaaatmmagagagataatmmaccma 240
||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||| |
Sbjct: 38136 tatgcaagagcctcacatatagtatagttgatagggaaataaagagagataataaaccaa 38077
Query: 241 aagaattgtcatgacatatcgtgaaatcctatmaccaggggatattttgtgccccatgta 300
|||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||
Sbjct: 38076 aagaattgtcatgacatatcgtgaaatcctataaccaggagatattttgtgcccaatgta 38017
Query: 301 gaaacmacttctcmattcccgtagccmacmaamvagtaatcagtcagaatattgccccmc 360
||||| ||||||| ||||| |||||| || || ||||||||||||||||||||| ||
Sbjct: 38016 gaaacaacttctcaattccagtagccaacaaaaaagtaatcagtcagaatattgcaccaa 37957
Query: 361 agcmctacttaagttgagggacgagagncagtcnttttataaggggatnggagagttgag 420
||| ||||||||||||||| ||||||| |||| ||||||||||| || | ||| |||||
Sbjct: 37956 agcactacttaagttgaggaacgagagaaagtcattttataagggaatagaagaattgag 37897
Query: 421 aatcagavaataccamsvccctcmmctgtttatmattgggctggcttttcacctctagcc 480
||| ||| ||||| | ||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 37896 aataagaaaatacaaaaaccctcaactgtttataattggactggcttttcacctctagca 37837
Query: 481 aatcttgggtttcttgggtccttgatgaactcttgggagtgagcagacaaatcagcagcc 540
||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||
Sbjct: 37836 aatcttgggtttcttggatcattgatgaactcttgggagttagcagacaaatcagcagcc 37777
Query: 541 ttggggatagcctagaacatgattaggccaccggcaaagaatggccagtatggcttcaaa 600
|||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 37776 ttggagatagcatagaacatgattagaccaccggcaaagaatggccagtatggcttcaaa 37717
Query: 601 actggagtcgggaatctcttgncccttgtgtnttgtnttgtttngtgtntnggntnttnc 660
|||||||| |||||||||||| || |||||| |||| |||||| |||| | | | || |
Sbjct: 37716 actggagtagggaatctcttgaccattgtgtattgtattgtttagtgtatagaatattac 37657
Query: 661 ctgggngggctgngcnntngcaaacaatagaaataaaaagattgaaggaataacaggaat 720
|||| || ||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 37656 ctggaaggactgagcaatagcaaacaatagaaataaaaagattgaaggaataacaggaat 37597
Query: 721 agaggatagaacgagagagtcttctggctggtacaacttcaactaaggtgt-actaatta 779
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 37596 agaggatagaacgagagagtcttctggctggtacaacttcaactaaggtgtaactaatta 37537
Query: 780 ttctattccagttccaattagattcagttttattttttactgcttcgaaaaatatgaaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37536 ttctattccagttccaattagattcagttttattttttactgcttcgaaaaatatgaaaa 37477
Query: 840 aatccagacactttgtaatccgggtaacatcatgattatgtgttggcgcgtgtgctgtat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37476 aatccagacactttgtaatccgggtaacatcatgattatgtgttggcgcgtgtgctgtat 37417
Query: 900 gcgccgtttggctattattatttccgggtaacattatgaatcctgtttgaagtgacggca 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37416 gcgccgtttggctattattatttccgggtaacattatgaatcctgtttgaagtgacggca 37357
Query: 960 ggggaaataacacaccatt 978
|||||||||||||||||||
Sbjct: 37356 ggggaaataacacaccatt 37338
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6892
Number of Sequences: 1807
Number of extensions: 6892
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)